STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND67730.1Hypothetical protein; Pfam: Carbohydrate-selective porin, OprB family. (409 aa)    
Predicted Functional Partners:
AND67729.1
Hypothetical protein.
       0.610
AND67731.1
Hypothetical protein.
       0.580
AND67685.1
Flagellar motor protein MotB; Pfam: OmpA family; PRINTS: OMPA domain signature.
     
 0.559
AND67686.1
Flagellar motor protein MotB; Pfam: OmpA family; PRINTS: OMPA domain signature.
     
 0.559
AND67732.1
Transcriptional regulator; Pfam: LytTr DNA-binding domain; SMART: cheY-homologous receiver domain; SMART: LytTr DNA-binding domain; Pfam: Response regulator receiver domain.
       0.547
AND67733.1
Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; SMART: Histidine kinase-like ATPases; Pfam: Histidine kinase.
       0.547
AND70300.1
Hypothetical protein; Pfam: TonB dependent receptor; TIGRFAM: TonB-B12: TonB-dependent vitamin B12 receptor; Pfam: TonB-dependent Receptor Plug Domain.
     
  0.540
Your Current Organism:
Dyella thiooxydans
NCBI taxonomy Id: 445710
Other names: D. thiooxydans, Dyella sp. ATSB10, Dyella thiooxydans Anandham et al. 2011, KACC 12756, LMG 24673, LMG:24673, strain ATSB10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.