STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND67846.1Hypothetical protein; Pfam: Mechanosensitive ion channel. (332 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
    0.573
AND67845.1
Hypothetical protein.
       0.457
AND70051.1
TIGRFAM: 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family; Pfam: Sodium/hydrogen exchanger family; Pfam: TrkA-N domain.
 
  
 0.445
AND68330.1
Pfam: Predicted membrane protein (DUF2254).
 
     0.425
AND70395.1
ATPase; SMART: Histidine kinase-like ATPases; SMART: His Kinase A (phosphoacceptor) domain; Pfam: PAS fold; PRINTS: Bacterial sensor protein C-terminal signature; SMART: cheY-homologous receiver domain; Pfam: His Kinase A (phospho-acceptor) domain; Pfam: Response regulator receiver domain; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
     
 0.411
AND69804.1
Hypothetical protein; Pfam: Putative ATP-dependant zinc protease.
 
   
 0.400
Your Current Organism:
Dyella thiooxydans
NCBI taxonomy Id: 445710
Other names: D. thiooxydans, Dyella sp. ATSB10, Dyella thiooxydans Anandham et al. 2011, KACC 12756, LMG 24673, LMG:24673, strain ATSB10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.