STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND68437.1Hypothetical protein; Pfam: Polysaccharide deacetylase. (258 aa)    
Predicted Functional Partners:
AND68452.1
tonB-denpendent receptor; TIGRFAM: TonB-Xanth-Caul: TonB-dependent receptor; Pfam: TonB-dependent Receptor Plug Domain; Pfam: TonB dependent receptor.
  
     0.497
AND67522.1
Pfam: Glycosyltransferase family 36; SMART: Putative carbohydrate binding domain; Pfam: Putative carbohydrate binding domain; Pfam: Putative glucoamylase; Pfam: Glycosyltransferase 36 associated family.
  
  
 0.495
AND67530.1
Polysaccharide deacetylase; Pfam: Glycosyltransferase like family 2; Pfam: Glycosyl hydrolases family 18; Pfam: Polysaccharide deacetylase.
  
  
 0.490
AND71278.1
Benzoate transporter; Pfam: Glycosyltransferase like family 2; Pfam: Glycosyl hydrolases family 17.
  
  
 0.445
AND68886.1
Hypothetical protein; Pfam: Tetrapyrrole (Corrin/Porphyrin) Methylases.
  
     0.433
AND68450.1
Glycoside hydrolase; Pfam: Beta-galactosidase.
  
     0.421
AND70988.1
Hypothetical protein; Pfam: Glycosyltransferase like family 2.
  
  
 0.419
AND68438.1
Hypothetical protein.
       0.403
Your Current Organism:
Dyella thiooxydans
NCBI taxonomy Id: 445710
Other names: D. thiooxydans, Dyella sp. ATSB10, Dyella thiooxydans Anandham et al. 2011, KACC 12756, LMG 24673, LMG:24673, strain ATSB10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.