STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND68456.1Hypothetical protein; Pfam: Histidine kinase. (295 aa)    
Predicted Functional Partners:
AND68455.1
Hypothetical protein; SMART: LytTr DNA-binding domain; Pfam: LytTr DNA-binding domain; SMART: cheY-homologous receiver domain; Pfam: Response regulator receiver domain.
 
 
 0.966
AND68506.1
Hypothetical protein; SMART: LytTr DNA-binding domain; Pfam: Response regulator receiver domain; SMART: cheY-homologous receiver domain; Pfam: LytTr DNA-binding domain.
 
 
 0.858
AND67732.1
Transcriptional regulator; Pfam: LytTr DNA-binding domain; SMART: cheY-homologous receiver domain; SMART: LytTr DNA-binding domain; Pfam: Response regulator receiver domain.
 
 
 0.856
AND70324.1
Pfam: Response regulator receiver domain; SMART: LytTr DNA-binding domain; SMART: cheY-homologous receiver domain; Pfam: LytTr DNA-binding domain.
 
 
 0.856
AND68457.1
Hypothetical protein.
       0.554
AND68453.1
ABC transporter permease; Pfam: MacB-like periplasmic core domain; Pfam: FtsX-like permease family.
       0.518
AND68454.1
ABC transporter ATP-binding protein; Pfam: FtsX-like permease family; Pfam: MacB-like periplasmic core domain.
       0.518
Your Current Organism:
Dyella thiooxydans
NCBI taxonomy Id: 445710
Other names: D. thiooxydans, Dyella sp. ATSB10, Dyella thiooxydans Anandham et al. 2011, KACC 12756, LMG 24673, LMG:24673, strain ATSB10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.