node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AND68596.1 | AND68597.1 | ATSB10_11420 | ATSB10_11430 | Hypothetical protein; Pfam: RnfH family Ubiquitin; Belongs to the UPF0125 (RnfH) family. | Pfam: Polyketide cyclase / dehydrase and lipid transport. | 0.736 |
AND68596.1 | smpB | ATSB10_11420 | ATSB10_11440 | Hypothetical protein; Pfam: RnfH family Ubiquitin; Belongs to the UPF0125 (RnfH) family. | ssrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.439 |
AND68597.1 | AND68596.1 | ATSB10_11430 | ATSB10_11420 | Pfam: Polyketide cyclase / dehydrase and lipid transport. | Hypothetical protein; Pfam: RnfH family Ubiquitin; Belongs to the UPF0125 (RnfH) family. | 0.736 |
AND68597.1 | AND69541.1 | ATSB10_11430 | ATSB10_20870 | Pfam: Polyketide cyclase / dehydrase and lipid transport. | Stringent starvation protein A; Pfam: Glutathione S-transferase, N-terminal domain. | 0.626 |
AND68597.1 | AND69728.1 | ATSB10_11430 | ATSB10_22740 | Pfam: Polyketide cyclase / dehydrase and lipid transport. | Ubiquinone biosynthesis protein UbiH; Pfam: FAD binding domain; PRINTS: Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature; TIGRFAM: Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family. | 0.476 |
AND68597.1 | AND70140.1 | ATSB10_11430 | ATSB10_26860 | Pfam: Polyketide cyclase / dehydrase and lipid transport. | Ubiquinone biosynthesis protein UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 0.496 |
AND68597.1 | AND70285.1 | ATSB10_11430 | ATSB10_28310 | Pfam: Polyketide cyclase / dehydrase and lipid transport. | Hypothetical protein; Pfam: FAD binding domain; TIGRFAM: Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PRINTS: Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature. | 0.496 |
AND68597.1 | bioC | ATSB10_11430 | ATSB10_31040 | Pfam: Polyketide cyclase / dehydrase and lipid transport. | malonyl-CoA O-methyltransferase; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway. | 0.492 |
AND68597.1 | dnaQ | ATSB10_11430 | ATSB10_08170 | Pfam: Polyketide cyclase / dehydrase and lipid transport. | DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.436 |
AND68597.1 | smpB | ATSB10_11430 | ATSB10_11440 | Pfam: Polyketide cyclase / dehydrase and lipid transport. | ssrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.600 |
AND68597.1 | ubiA | ATSB10_11430 | ATSB10_31130 | Pfam: Polyketide cyclase / dehydrase and lipid transport. | 4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.527 |
AND68597.1 | ubiG | ATSB10_11430 | ATSB10_16530 | Pfam: Polyketide cyclase / dehydrase and lipid transport. | 3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. | 0.550 |
AND69541.1 | AND68597.1 | ATSB10_20870 | ATSB10_11430 | Stringent starvation protein A; Pfam: Glutathione S-transferase, N-terminal domain. | Pfam: Polyketide cyclase / dehydrase and lipid transport. | 0.626 |
AND69541.1 | AND69728.1 | ATSB10_20870 | ATSB10_22740 | Stringent starvation protein A; Pfam: Glutathione S-transferase, N-terminal domain. | Ubiquinone biosynthesis protein UbiH; Pfam: FAD binding domain; PRINTS: Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature; TIGRFAM: Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family. | 0.468 |
AND69728.1 | AND68597.1 | ATSB10_22740 | ATSB10_11430 | Ubiquinone biosynthesis protein UbiH; Pfam: FAD binding domain; PRINTS: Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature; TIGRFAM: Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family. | Pfam: Polyketide cyclase / dehydrase and lipid transport. | 0.476 |
AND69728.1 | AND69541.1 | ATSB10_22740 | ATSB10_20870 | Ubiquinone biosynthesis protein UbiH; Pfam: FAD binding domain; PRINTS: Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature; TIGRFAM: Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family. | Stringent starvation protein A; Pfam: Glutathione S-transferase, N-terminal domain. | 0.468 |
AND69728.1 | AND70140.1 | ATSB10_22740 | ATSB10_26860 | Ubiquinone biosynthesis protein UbiH; Pfam: FAD binding domain; PRINTS: Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature; TIGRFAM: Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family. | Ubiquinone biosynthesis protein UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 0.553 |
AND69728.1 | AND70285.1 | ATSB10_22740 | ATSB10_28310 | Ubiquinone biosynthesis protein UbiH; Pfam: FAD binding domain; PRINTS: Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature; TIGRFAM: Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family. | Hypothetical protein; Pfam: FAD binding domain; TIGRFAM: Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PRINTS: Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature. | 0.922 |
AND69728.1 | ubiA | ATSB10_22740 | ATSB10_31130 | Ubiquinone biosynthesis protein UbiH; Pfam: FAD binding domain; PRINTS: Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature; TIGRFAM: Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family. | 4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.711 |
AND69728.1 | ubiG | ATSB10_22740 | ATSB10_16530 | Ubiquinone biosynthesis protein UbiH; Pfam: FAD binding domain; PRINTS: Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature; TIGRFAM: Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family. | 3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. | 0.974 |