STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND68650.1ABC transporter; Pfam: Peptidase C39 family; Pfam: ABC transporter transmembrane region; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter. (715 aa)    
Predicted Functional Partners:
AND68651.1
Anibiotic ABC transporter; Pfam: Biotin-lipoyl like; PRINTS: Gram-negative bacterial RTX secretion protein D signature; Pfam: HlyD family secretion protein.
 
  
 0.954
AND67595.1
Hypothetical protein; Pfam: Siderophore-interacting FAD-binding domain; Pfam: Siderophore-interacting protein.
   
   0.873
msbA
ATP-binding protein; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
 
 
 
0.811
AND68308.1
Pfam: ABC transporter; Pfam: ABC transporter transmembrane region; SMART: ATPases associated with a variety of cellular activities; TIGRFAM: MsbA_rel: ABC transporter, permease/ATP-binding protein.
 
 
 
0.807
AND67966.1
Multidrug ABC transporter ATP-binding protein; Pfam: ABC transporter; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter transmembrane region.
 
 
 
0.803
AND67597.1
ABC transporter ATP-binding protein; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter.
   
 
0.794
AND70856.1
Pfam: Outer membrane efflux protein; TIGRFAM: type_I_sec_TolC: type I secretion outer membrane protein, TolC family.
  
  
 0.780
AND68973.1
Hypothetical protein; Pfam: YXWGXW repeat (2 copies).
  
  
 0.604
AND71252.1
Hypothetical protein.
  
  
 0.604
AND68196.1
Pfam: HlyD family secretion protein.
  
 
 0.569
Your Current Organism:
Dyella thiooxydans
NCBI taxonomy Id: 445710
Other names: D. thiooxydans, Dyella sp. ATSB10, Dyella thiooxydans Anandham et al. 2011, KACC 12756, LMG 24673, LMG:24673, strain ATSB10
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.