STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND69058.1Hypothetical protein. (179 aa)    
Predicted Functional Partners:
AND69059.1
TIGRFAM: vgr_GE: Rhs element Vgr protein; TIGRFAM: VI_Rhs_Vgr: type VI secretion system Vgr family protein; Pfam: Phage-related baseplate assembly protein; Pfam: Phage late control gene D protein (GPD).
 
     0.936
AND69057.1
Hypothetical protein; SMART: Forkhead associated domain; Pfam: FHA domain; TIGRFAM: VI_FHA: type VI secretion system FHA domain protein.
 
     0.908
AND69056.1
TIGRFAM: VI_chp_4: type VI secretion protein, VC_A0114 family; Pfam: Bacterial protein of unknown function (DUF876).
 
     0.890
AND69054.1
Type VI secretion protein; Pfam: ImcF-related N-terminal domain; TIGRFAM: VI_IcmF: type VI secretion protein IcmF; Pfam: Intracellular multiplication and human macrophage-killing; Pfam: Protein of unknown function (DUF1215).
 
     0.840
AND69049.1
Pfam: Protein kinase domain; Pfam: Sulfatase-modifying factor enzyme 1.
 
 
 
 0.827
AND69061.1
Hypothetical protein; Pfam: PAAR motif.
 
     0.823
AND69055.1
Membrane protein; TIGRFAM: IV_VI_DotU: type IV/VI secretion system protein, DotU family; Pfam: Uncharacterized protein conserved in bacteria (DUF2077); Pfam: OmpA family.
 
     0.812
AND69053.1
Pfam: Uncharacterized protein conserved in bacteria (DUF2094); TIGRFAM: VI_minor_4: type VI secretion-associated protein, BMA_A0400 family.
 
     0.810
AND69060.1
Hypothetical protein; SMART: Tetratricopeptide repeats; Pfam: Tetratricopeptide repeat; Pfam: TPR repeat; Pfam: Methyltransferase domain.
 
 
 0.798
AND69072.1
Pfam: Protein of unknown function (DUF796).
 
     0.783
Your Current Organism:
Dyella thiooxydans
NCBI taxonomy Id: 445710
Other names: D. thiooxydans, Dyella sp. ATSB10, Dyella thiooxydans Anandham et al. 2011, KACC 12756, LMG 24673, LMG:24673, strain ATSB10
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