STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND69128.1Pfam: Maltose operon periplasmic protein precursor (MalM). (264 aa)    
Predicted Functional Partners:
AND69129.1
Hypothetical protein.
       0.797
AND69130.1
PRINTS: Glucose/ribitol dehydrogenase family signature; Pfam: Enoyl-(Acyl carrier protein) reductase.
       0.740
asnS
Pfam: tRNA synthetases class II (D, K and N); PRINTS: Aspartyl-tRNA synthetase signature; TIGRFAM: asnS: asparagine--tRNA ligase; Pfam: OB-fold nucleic acid binding domain.
       0.733
AND69131.1
DNA-(apurinic or apyrimidinic site) lyase; SMART: Formamidopyrimidine-DNA glycosylase N-terminal domain; Pfam: Formamidopyrimidine-DNA glycosylase N-terminal domain; Pfam: Formamidopyrimidine-DNA glycosylase H2TH domain.
       0.731
AND70059.1
Hypothetical protein; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter; Pfam: TOBE domain.
  
  
 0.645
AND70342.1
Sugar ABC transporter permease; Pfam: Binding-protein-dependent transport system inner membrane component.
  
  
 0.586
AND69132.1
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
       0.530
AND69126.1
Pfam: Iron-sulphur cluster biosynthesis; TIGRFAM: TIGR00049: iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
       0.493
Your Current Organism:
Dyella thiooxydans
NCBI taxonomy Id: 445710
Other names: D. thiooxydans, Dyella sp. ATSB10, Dyella thiooxydans Anandham et al. 2011, KACC 12756, LMG 24673, LMG:24673, strain ATSB10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.