STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND69296.1Hypothetical protein; Pfam: Cupin domain. (123 aa)    
Predicted Functional Partners:
AND69297.1
Hypothetical protein; Pfam: TraB family.
  
    0.791
AND68511.1
Hypothetical protein; Pfam: Cupin domain.
  
     0.698
AND69295.1
Hypothetical protein; Pfam: MASE1; Pfam: GGDEF domain; TIGRFAM: GGDEF: diguanylate cyclase (GGDEF) domain; SMART: diguanylate cyclase.
       0.623
AND70986.1
Hypothetical protein; TIGRFAM: AA-adenyl-dom: amino acid adenylation domain; Pfam: AMP-binding enzyme C-terminal domain; Pfam: Phosphopantetheine attachment site; Pfam: AMP-binding enzyme; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.494
AND71054.1
Hypothetical protein; Pfam: Bacterial transferase hexapeptide (six repeats); Pfam: WxcM-like, C-terminal.
  
  
 0.492
AND69294.1
TIGRFAM: pro_imino_pep_2: proline-specific peptidase; Pfam: Alpha/beta hydrolase family; PRINTS: Prolyl aminopeptidase (S33) family signature.
 
     0.484
AND67920.1
Hypothetical protein; Pfam: Nitroreductase family.
  
     0.406
Your Current Organism:
Dyella thiooxydans
NCBI taxonomy Id: 445710
Other names: D. thiooxydans, Dyella sp. ATSB10, Dyella thiooxydans Anandham et al. 2011, KACC 12756, LMG 24673, LMG:24673, strain ATSB10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.