STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND69794.1Hypothetical protein; Pfam: Cbb3-type cytochrome oxidase component FixQ. (47 aa)    
Predicted Functional Partners:
AND70263.1
Pfam: Cbb3-type cytochrome oxidase component FixQ.
     
  0.900
AND69793.1
Hypothetical protein; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 
 0.777
AND69795.1
Hypothetical protein; Pfam: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: ccoO: cytochrome c oxidase, cbb3-type, subunit II.
  
  
 0.714
AND69796.1
TIGRFAM: ccoN: cytochrome c oxidase, cbb3-type, subunit I; Pfam: Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.714
AND70264.1
Peptidase S41; TIGRFAM: ccoO: cytochrome c oxidase, cbb3-type, subunit II; Pfam: Cytochrome C oxidase, mono-heme subunit/FixO.
  
  
 0.714
AND70265.1
TIGRFAM: ccoN: cytochrome c oxidase, cbb3-type, subunit I; Pfam: Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.714
AND71063.1
Pfam: Protein of unknown function (DUF465).
   
    0.685
AND70262.1
Cytochrome-cbb3 oxidase subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 
 0.560
AND69791.1
Cytochrome C oxidase; Pfam: IG-like fold at C-terminal of FixG, putative oxidoreductase; Pfam: 4Fe-4S binding domain; Pfam: 4Fe-4S dicluster domain.
  
  
 0.553
AND70246.1
Membrane protein; Pfam: Multicopper oxidase; Pfam: Cytochrome C oxidase, cbb3-type, subunit III; PRINTS: Copper containing nitrite reductase signature; TIGRFAM: Cu_nitrite_red: nitrite reductase, copper-containing.
  
 
 0.537
Your Current Organism:
Dyella thiooxydans
NCBI taxonomy Id: 445710
Other names: D. thiooxydans, Dyella sp. ATSB10, Dyella thiooxydans Anandham et al. 2011, KACC 12756, LMG 24673, LMG:24673, strain ATSB10
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