STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND69940.1Hypothetical protein; TIGRFAM: yihY_not_rbn: YihY family inner membrane protein; Pfam: Virulence factor BrkB. (301 aa)    
Predicted Functional Partners:
AND69941.1
Hypothetical protein; Pfam: Glycine zipper 2TM domain.
       0.631
AND69942.1
Pfam: Universal stress protein family; PRINTS: Universal stress protein signature.
  
    0.534
AND70987.1
Glutamate-1-semialdehyde 2,1-aminomutase; Pfam: Condensation domain; TIGRFAM: AA-adenyl-dom: amino acid adenylation domain; Pfam: Acyl transferase domain; Pfam: Phosphopantetheine attachment site; SMART: Phosphopantetheine attachment site; Pfam: AMP-binding enzyme C-terminal domain; Pfam: Beta-ketoacyl synthase, C-terminal domain; SMART: Beta-ketoacyl synthase; Pfam: Beta-ketoacyl synthase, N-terminal domain; SMART: Acyl transferase domain in polyketide synthase (PKS) enzymes; Pfam: Aminotransferase class-III; Pfam: HxxPF-repeated domain; Pfam: AMP-binding enzyme.
  
   
 0.490
AND69939.1
Hypothetical protein.
       0.466
Your Current Organism:
Dyella thiooxydans
NCBI taxonomy Id: 445710
Other names: D. thiooxydans, Dyella sp. ATSB10, Dyella thiooxydans Anandham et al. 2011, KACC 12756, LMG 24673, LMG:24673, strain ATSB10
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.