STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND69973.1Endopeptidase IV; Pfam: Peptidase family S49; TIGRFAM: SppA_67K: signal peptide peptidase SppA, 67K type; TIGRFAM: SppA_dom: signal peptide peptidase SppA, 36K type. (622 aa)    
Predicted Functional Partners:
AND69974.1
Multidrug transporter MATE; TIGRFAM: matE: MATE efflux family protein; Pfam: MatE.
       0.718
AND69975.1
Pfam: Protein of unknown function (DUF3667).
  
  
 0.540
AND67503.1
Hypothetical protein; SMART: Tetratricopeptide repeats; Pfam: Tetratricopeptide repeat; Pfam: TPR repeat.
   
 
 0.525
AND70986.1
Hypothetical protein; TIGRFAM: AA-adenyl-dom: amino acid adenylation domain; Pfam: AMP-binding enzyme C-terminal domain; Pfam: Phosphopantetheine attachment site; Pfam: AMP-binding enzyme; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.490
AND70924.1
Hypothetical protein; Pfam: Bacterial PH domain.
   
    0.487
Your Current Organism:
Dyella thiooxydans
NCBI taxonomy Id: 445710
Other names: D. thiooxydans, Dyella sp. ATSB10, Dyella thiooxydans Anandham et al. 2011, KACC 12756, LMG 24673, LMG:24673, strain ATSB10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.