STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND70204.1Pfam: Dolichyl-phosphate-mannose-protein mannosyltransferase. (570 aa)    
Predicted Functional Partners:
AND70205.1
Hypothetical protein; Pfam: Tetratricopeptide repeat.
       0.788
AND70332.1
Dolichol-phosphate mannosyltransferase; Pfam: Glycosyl transferase family 2.
 
  
 0.755
AND70400.1
Hypothetical protein.
  
     0.696
AND70197.1
Pfam: Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
     0.694
AND68614.1
Pfam: Lipid A Biosynthesis N-terminal domain.
 
     0.677
AND69716.1
Phosphoesterase PA-phosphatase; SMART: Acid phosphatase homologues; Pfam: PAP2 superfamily.
 
  
 0.637
AND70203.1
Pfam: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase.
       0.617
AND70541.1
Pfam: Protein of unknown function (DUF1481); Pfam: Type III secretion system lipoprotein chaperone (YscW).
  
    0.594
AND68187.1
Hypothetical protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.
  
     0.585
AND70440.1
Pfam: Bacterial protein of unknown function (DUF883).
  
     0.536
Your Current Organism:
Dyella thiooxydans
NCBI taxonomy Id: 445710
Other names: D. thiooxydans, Dyella sp. ATSB10, Dyella thiooxydans Anandham et al. 2011, KACC 12756, LMG 24673, LMG:24673, strain ATSB10
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