STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND70595.1Pfam: TonB-dependent Receptor Plug Domain; Pfam: Outer membrane protein beta-barrel family; TIGRFAM: TonB-Xanth-Caul: TonB-dependent receptor. (966 aa)    
Predicted Functional Partners:
AND67792.1
Transcription factor; Pfam: Cupin-like domain; SMART: A domain family that is part of the cupin metalloenzyme superfamily.
 
     0.718
AND70046.1
Hypothetical protein; Pfam: TonB-dependent Receptor Plug Domain; Pfam: TonB dependent receptor.
  
    0.698
AND68327.1
Pfam: TonB dependent receptor; Pfam: TonB-dependent Receptor Plug Domain.
  
    0.689
AND69160.1
Hypothetical protein; Pfam: TonB-dependent Receptor Plug Domain; Pfam: TonB dependent receptor.
  
    0.684
AND70339.1
Pfam: Tryptophan halogenase.
 
     0.680
AND71114.1
Hypothetical protein; Pfam: Tryptophan halogenase.
 
     0.674
AND70944.1
Hypothetical protein; Pfam: Tryptophan halogenase.
 
     0.672
AND67514.1
Hypothetical protein; Pfam: Tryptophan halogenase.
 
     0.666
AND70239.1
Hypothetical protein; Pfam: Tryptophan halogenase.
 
     0.655
AND71238.1
Hypothetical protein; Pfam: SapC.
 
     0.654
Your Current Organism:
Dyella thiooxydans
NCBI taxonomy Id: 445710
Other names: D. thiooxydans, Dyella sp. ATSB10, Dyella thiooxydans Anandham et al. 2011, KACC 12756, LMG 24673, LMG:24673, strain ATSB10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.