STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND70755.1Hypothetical protein; Pfam: PapC N-terminal domain; Pfam: PapC C-terminal domain; Pfam: Outer membrane usher protein. (907 aa)    
Predicted Functional Partners:
AND70754.1
Pfam: Fimbrial protein.
 
 
 0.997
AND70756.1
Hypothetical protein; PRINTS: Pili chaperone signature; Pfam: Pili and flagellar-assembly chaperone, PapD N-terminal domain; Pfam: Pili assembly chaperone PapD, C-terminal domain.
 
 
 0.997
AND70757.1
Pfam: Fimbrial protein.
 
 
 0.948
AND69487.1
Hypothetical protein; Pfam: psiF repeat.
  
     0.660
AND70697.1
Hypothetical protein; Pfam: TrbC/VIRB2 family.
   
    0.634
AND70696.1
Hypothetical protein; Pfam: Type IV secretory pathway, VirB3-like protein.
   
    0.616
AND70693.1
Hypothetical protein; Pfam: TrbL/VirB6 plasmid conjugal transfer protein.
   
    0.583
AND69249.1
Pfam: Protein of unknown function (DUF1311).
  
     0.579
AND70695.1
Hypothetical protein; TIGRFAM: VirB4_CagE: type IV secretion/conjugal transfer ATPase, VirB4 family; Pfam: CagE, TrbE, VirB family, component of type IV transporter system; Pfam: AAA-like domain.
   
    0.579
AND70702.1
Pfam: VirB8 protein.
   
    0.576
Your Current Organism:
Dyella thiooxydans
NCBI taxonomy Id: 445710
Other names: D. thiooxydans, Dyella sp. ATSB10, Dyella thiooxydans Anandham et al. 2011, KACC 12756, LMG 24673, LMG:24673, strain ATSB10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.