STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND71083.1Hypothetical protein. (229 aa)    
Predicted Functional Partners:
AND71054.1
Hypothetical protein; Pfam: Bacterial transferase hexapeptide (six repeats); Pfam: WxcM-like, C-terminal.
  
  
 0.849
AND69808.1
UDP-phosphate N-acetylglucosaminyl-1-phosphate transferase; Pfam: Glycosyl transferase family 4.
  
  
 0.846
AND71082.1
Hypothetical protein; Pfam: Glycosyl transferase 4-like domain; Pfam: Glycosyl transferases group 1.
 
    0.832
AND69716.1
Phosphoesterase PA-phosphatase; SMART: Acid phosphatase homologues; Pfam: PAP2 superfamily.
 
  
 0.753
AND70077.1
Hypothetical protein.
  
     0.738
AND69562.1
Hypothetical protein.
 
     0.734
AND70400.1
Hypothetical protein.
  
     0.733
AND71071.1
TIGRFAM: dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase; Pfam: NAD dependent epimerase/dehydratase family; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.708
AND70541.1
Pfam: Protein of unknown function (DUF1481); Pfam: Type III secretion system lipoprotein chaperone (YscW).
  
     0.706
AND71070.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.704
Your Current Organism:
Dyella thiooxydans
NCBI taxonomy Id: 445710
Other names: D. thiooxydans, Dyella sp. ATSB10, Dyella thiooxydans Anandham et al. 2011, KACC 12756, LMG 24673, LMG:24673, strain ATSB10
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.