STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND71161.1Esterase; TIGRFAM: PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular; Pfam: PHB de-polymerase C-terminus. (417 aa)    
Predicted Functional Partners:
AND68406.1
Hypothetical protein; Pfam: Poly-beta-hydroxybutyrate polymerase N terminal; Pfam: alpha/beta hydrolase fold; Pfam: Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus.
 
  
 0.968
AND68050.1
Poly-beta-hydroxybutyrate polymerase; Pfam: alpha/beta hydrolase fold; TIGRFAM: PHA_synth_III_C: poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit.
 
  
 0.932
AND67657.1
Hydrogenase; Pfam: 3HB-oligomer hydrolase (3HBOH).
  
  
  0.928
AND68049.1
Hypothetical protein; Pfam: Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E).
   
 
  0.900
glsA
Glutaminase; TIGRFAM: Gln_ase: glutaminase A; Pfam: Glutaminase; Belongs to the glutaminase family.
       0.666
AND68194.1
Poly (3-hydroxybutyrate) depolymerase; TIGRFAM: PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR; Pfam: PHB accumulation regulatory domain; Pfam: PHB/PHA accumulation regulator DNA-binding domain.
 
   
 0.627
AND70282.1
Membrane protein; Pfam: Domain of unknown function (DUF802).
  
     0.589
AND70280.1
Pfam: Protein of unknown function (DUF2894).
  
     0.585
AND70283.1
Pfam: Protein of unknown function (DUF3348).
  
     0.562
AND71162.1
Hypothetical protein; Pfam: RDD family.
       0.555
Your Current Organism:
Dyella thiooxydans
NCBI taxonomy Id: 445710
Other names: D. thiooxydans, Dyella sp. ATSB10, Dyella thiooxydans Anandham et al. 2011, KACC 12756, LMG 24673, LMG:24673, strain ATSB10
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