Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AND69562.1 | AND69906.1 | ATSB10_21080 | ATSB10_24520 | Hypothetical protein. | Histidine kinase; Pfam: HAMP domain; SMART: Histidine kinase-like ATPases; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; SMART: His Kinase A (phosphoacceptor) domain; Pfam: His Kinase A (phospho-acceptor) domain. | 0.455 |
AND69562.1 | AND71228.1 | ATSB10_21080 | ATSB10_37740 | Hypothetical protein. | Hypothetical protein. | 0.461 |
AND69906.1 | AND69562.1 | ATSB10_24520 | ATSB10_21080 | Histidine kinase; Pfam: HAMP domain; SMART: Histidine kinase-like ATPases; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; SMART: His Kinase A (phosphoacceptor) domain; Pfam: His Kinase A (phospho-acceptor) domain. | Hypothetical protein. | 0.455 |
AND69906.1 | AND71228.1 | ATSB10_24520 | ATSB10_37740 | Histidine kinase; Pfam: HAMP domain; SMART: Histidine kinase-like ATPases; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; SMART: His Kinase A (phosphoacceptor) domain; Pfam: His Kinase A (phospho-acceptor) domain. | Hypothetical protein. | 0.448 |
AND71228.1 | AND69562.1 | ATSB10_37740 | ATSB10_21080 | Hypothetical protein. | Hypothetical protein. | 0.461 |
AND71228.1 | AND69906.1 | ATSB10_37740 | ATSB10_24520 | Hypothetical protein. | Histidine kinase; Pfam: HAMP domain; SMART: Histidine kinase-like ATPases; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; SMART: His Kinase A (phosphoacceptor) domain; Pfam: His Kinase A (phospho-acceptor) domain. | 0.448 |
AND71228.1 | AND71229.1 | ATSB10_37740 | ATSB10_37750 | Hypothetical protein. | Pfam: LysR substrate binding domain; PRINTS: LysR bacterial regulatory protein HTH signature; Pfam: Bacterial regulatory helix-turn-helix protein, lysR family; Belongs to the LysR transcriptional regulatory family. | 0.718 |
AND71229.1 | AND71228.1 | ATSB10_37750 | ATSB10_37740 | Pfam: LysR substrate binding domain; PRINTS: LysR bacterial regulatory protein HTH signature; Pfam: Bacterial regulatory helix-turn-helix protein, lysR family; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.718 |