SFP36416.1 protein (Nitrosomonas cryotolerans)

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Score

SFP36416.1

Hypothetical protein. (191 aa)

Predicted Functional Partners:

rplU

0.923

rpsC

0.921

rpsO

0.921

rplM

0.921

rpmH

0.919

rpmF

0.919

rpmD

0.919

rplR

0.919

rplC

0.919

rplP

0.918

Your Current Organism:

Nitrosomonas cryotolerans

NCBI taxonomy Id: 44575
Other names: N. cryotolerans

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFP36416.1	rplC	SAMN05216419_1001140	SAMN05216419_101140	Hypothetical protein.	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.919
SFP36416.1	rplM	SAMN05216419_1001140	SAMN05216419_104015	Hypothetical protein.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.921
SFP36416.1	rplP	SAMN05216419_1001140	SAMN05216419_101133	Hypothetical protein.	LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.918
SFP36416.1	rplR	SAMN05216419_1001140	SAMN05216419_101124	Hypothetical protein.	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.919
SFP36416.1	rplU	SAMN05216419_1001140	SAMN05216419_10126	Hypothetical protein.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.923
SFP36416.1	rpmD	SAMN05216419_1001140	SAMN05216419_101122	Hypothetical protein.	LSU ribosomal protein L30P.	0.919
SFP36416.1	rpmF	SAMN05216419_1001140	SAMN05216419_100717	Hypothetical protein.	LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.	0.919
SFP36416.1	rpmH	SAMN05216419_1001140	SAMN05216419_1002108	Hypothetical protein.	LSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family.	0.919
SFP36416.1	rpsC	SAMN05216419_1001140	SAMN05216419_101134	Hypothetical protein.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.921
SFP36416.1	rpsO	SAMN05216419_1001140	SAMN05216419_10384	Hypothetical protein.	SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.921
rplC	SFP36416.1	SAMN05216419_101140	SAMN05216419_1001140	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Hypothetical protein.	0.919
rplC	rplM	SAMN05216419_101140	SAMN05216419_104015	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rplC	rplP	SAMN05216419_101140	SAMN05216419_101133	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.999
rplC	rplR	SAMN05216419_101140	SAMN05216419_101124	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.999
rplC	rplU	SAMN05216419_101140	SAMN05216419_10126	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.998
rplC	rpmD	SAMN05216419_101140	SAMN05216419_101122	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L30P.	0.999
rplC	rpmF	SAMN05216419_101140	SAMN05216419_100717	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.	0.997
rplC	rpmH	SAMN05216419_101140	SAMN05216419_1002108	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family.	0.989
rplC	rpsC	SAMN05216419_101140	SAMN05216419_101134	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.999
rplC	rpsO	SAMN05216419_101140	SAMN05216419_10384	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.999