Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFP40020.1 | SFP40040.1 | SAMN05216419_100238 | SAMN05216419_100239 | Uncharacterized membrane protein, DUF4010 family. | Exonuclease RecJ. | 0.836 |
SFP40020.1 | SFP40069.1 | SAMN05216419_100238 | SAMN05216419_100240 | Uncharacterized membrane protein, DUF4010 family. | Magnesium and cobalt transporter. | 0.662 |
SFP40020.1 | SFP40120.1 | SAMN05216419_100238 | SAMN05216419_100242 | Uncharacterized membrane protein, DUF4010 family. | Phosphate starvation-inducible protein PhoH. | 0.489 |
SFP40020.1 | ybeY | SAMN05216419_100238 | SAMN05216419_100241 | Uncharacterized membrane protein, DUF4010 family. | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.514 |
SFP40040.1 | SFP40020.1 | SAMN05216419_100239 | SAMN05216419_100238 | Exonuclease RecJ. | Uncharacterized membrane protein, DUF4010 family. | 0.836 |
SFP40040.1 | SFP40069.1 | SAMN05216419_100239 | SAMN05216419_100240 | Exonuclease RecJ. | Magnesium and cobalt transporter. | 0.663 |
SFP40040.1 | SFP40120.1 | SAMN05216419_100239 | SAMN05216419_100242 | Exonuclease RecJ. | Phosphate starvation-inducible protein PhoH. | 0.490 |
SFP40040.1 | miaB | SAMN05216419_100239 | SAMN05216419_100243 | Exonuclease RecJ. | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.410 |
SFP40040.1 | ybeY | SAMN05216419_100239 | SAMN05216419_100241 | Exonuclease RecJ. | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.514 |
SFP40069.1 | SFP40020.1 | SAMN05216419_100240 | SAMN05216419_100238 | Magnesium and cobalt transporter. | Uncharacterized membrane protein, DUF4010 family. | 0.662 |
SFP40069.1 | SFP40040.1 | SAMN05216419_100240 | SAMN05216419_100239 | Magnesium and cobalt transporter. | Exonuclease RecJ. | 0.663 |
SFP40069.1 | SFP40120.1 | SAMN05216419_100240 | SAMN05216419_100242 | Magnesium and cobalt transporter. | Phosphate starvation-inducible protein PhoH. | 0.742 |
SFP40069.1 | SFP59269.1 | SAMN05216419_100240 | SAMN05216419_100842 | Magnesium and cobalt transporter. | Hypoxanthine phosphoribosyltransferase. | 0.479 |
SFP40069.1 | SFP74454.1 | SAMN05216419_100240 | SAMN05216419_10172 | Magnesium and cobalt transporter. | Membrane protein TerC, possibly involved in tellurium resistance. | 0.801 |
SFP40069.1 | SFQ14270.1 | SAMN05216419_100240 | SAMN05216419_10736 | Magnesium and cobalt transporter. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.420 |
SFP40069.1 | hflX | SAMN05216419_100240 | SAMN05216419_105813 | Magnesium and cobalt transporter. | GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.403 |
SFP40069.1 | lnt | SAMN05216419_100240 | SAMN05216419_10157 | Magnesium and cobalt transporter. | Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. | 0.426 |
SFP40069.1 | miaB | SAMN05216419_100240 | SAMN05216419_100243 | Magnesium and cobalt transporter. | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.526 |
SFP40069.1 | ybeY | SAMN05216419_100240 | SAMN05216419_100241 | Magnesium and cobalt transporter. | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.898 |
SFP40120.1 | SFP40020.1 | SAMN05216419_100242 | SAMN05216419_100238 | Phosphate starvation-inducible protein PhoH. | Uncharacterized membrane protein, DUF4010 family. | 0.489 |
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