Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFP52477.1 | SFP52499.1 | SAMN05216419_100565 | SAMN05216419_100566 | Hypothetical protein. | Curli production assembly/transport component CsgF. | 0.543 |
SFP52499.1 | SFP52477.1 | SAMN05216419_100566 | SAMN05216419_100565 | Curli production assembly/transport component CsgF. | Hypothetical protein. | 0.543 |
SFP52499.1 | SFP52519.1 | SAMN05216419_100566 | SAMN05216419_100567 | Curli production assembly/transport component CsgF. | Curli production assembly/transport component CsgG. | 0.999 |
SFP52499.1 | SFP52634.1 | SAMN05216419_100566 | SAMN05216419_100572 | Curli production assembly/transport component CsgF. | Curli biogenesis system outer membrane secretion channel CsgG. | 0.981 |
SFP52499.1 | SFP71786.1 | SAMN05216419_100566 | SAMN05216419_101511 | Curli production assembly/transport component CsgF. | Curli assembly protein CsgE. | 0.917 |
SFP52519.1 | SFP52499.1 | SAMN05216419_100567 | SAMN05216419_100566 | Curli production assembly/transport component CsgG. | Curli production assembly/transport component CsgF. | 0.999 |
SFP52519.1 | SFP71786.1 | SAMN05216419_100567 | SAMN05216419_101511 | Curli production assembly/transport component CsgG. | Curli assembly protein CsgE. | 0.955 |
SFP52634.1 | SFP52499.1 | SAMN05216419_100572 | SAMN05216419_100566 | Curli biogenesis system outer membrane secretion channel CsgG. | Curli production assembly/transport component CsgF. | 0.981 |
SFP52634.1 | SFP71786.1 | SAMN05216419_100572 | SAMN05216419_101511 | Curli biogenesis system outer membrane secretion channel CsgG. | Curli assembly protein CsgE. | 0.955 |
SFP71786.1 | SFP52499.1 | SAMN05216419_101511 | SAMN05216419_100566 | Curli assembly protein CsgE. | Curli production assembly/transport component CsgF. | 0.917 |
SFP71786.1 | SFP52519.1 | SAMN05216419_101511 | SAMN05216419_100567 | Curli assembly protein CsgE. | Curli production assembly/transport component CsgG. | 0.955 |
SFP71786.1 | SFP52634.1 | SAMN05216419_101511 | SAMN05216419_100572 | Curli assembly protein CsgE. | Curli biogenesis system outer membrane secretion channel CsgG. | 0.955 |