STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP60621.1Transcriptional regulator, BadM/Rrf2 family. (157 aa)    
Predicted Functional Partners:
SFP60784.1
Nitrogen fixation protein NifU.
  
  
 0.962
SFP82473.1
Cysteine desulfurase.
  
 
 0.958
SFP91444.1
Flagellar motor switch protein FliG.
    
   0.756
SFP60676.1
Iron-regulated ABC transporter membrane component SufB.
     
 0.580
SFP60643.1
Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family.
  
  
 0.565
SFP60810.1
Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain.
  
  
 0.565
SFP60728.1
Iron-regulated ABC transporter permease protein SufD.
     
 0.560
SFP60700.1
Iron-regulated ABC transporter ATPase subunit SufC.
     
 0.549
SFP60758.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
       0.512
SFQ14270.1
Diguanylate cyclase (GGDEF) domain-containing protein.
     
 0.494
Your Current Organism:
Nitrosomonas cryotolerans
NCBI taxonomy Id: 44575
Other names: N. cryotolerans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.