STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP88513.1Hypothetical protein. (289 aa)    
Predicted Functional Partners:
SFQ14270.1
Diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.967
SFP73912.1
PAS domain S-box-containing protein.
  
 0.947
SFP92978.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 
 0.936
SFP88481.1
Outer membrane transport energization protein ExbB.
       0.801
SFP88497.1
Outer membrane transport energization protein ExbD.
       0.801
SFQ17915.1
GAF domain-containing protein.
    
 0.798
ribB
GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
 
 0.781
SFP46078.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.762
SFP82231.1
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator).
     
 0.704
SFP49244.1
Diguanylate cyclase (GGDEF) domain-containing protein.
     
 0.680
Your Current Organism:
Nitrosomonas cryotolerans
NCBI taxonomy Id: 44575
Other names: N. cryotolerans
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