Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDX49581.1 | SDX49615.1 | SAMN05421881_100278 | SAMN05421881_100279 | Fic family protein. | Hypothetical protein. | 0.697 |
SDX49581.1 | SDX49652.1 | SAMN05421881_100278 | SAMN05421881_100280 | Fic family protein. | REP element-mobilizing transposase RayT. | 0.689 |
SDX49581.1 | SDX49683.1 | SAMN05421881_100278 | SAMN05421881_100281 | Fic family protein. | Hypothetical protein. | 0.689 |
SDX49581.1 | SDX49765.1 | SAMN05421881_100278 | SAMN05421881_100283 | Fic family protein. | Exonuclease SbcC. | 0.461 |
SDX49581.1 | sbcD | SAMN05421881_100278 | SAMN05421881_100282 | Fic family protein. | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.473 |
SDX49615.1 | SDX49581.1 | SAMN05421881_100279 | SAMN05421881_100278 | Hypothetical protein. | Fic family protein. | 0.697 |
SDX49615.1 | SDX49652.1 | SAMN05421881_100279 | SAMN05421881_100280 | Hypothetical protein. | REP element-mobilizing transposase RayT. | 0.809 |
SDX49615.1 | SDX49683.1 | SAMN05421881_100279 | SAMN05421881_100281 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SDX49615.1 | SDX49765.1 | SAMN05421881_100279 | SAMN05421881_100283 | Hypothetical protein. | Exonuclease SbcC. | 0.575 |
SDX49615.1 | sbcD | SAMN05421881_100279 | SAMN05421881_100282 | Hypothetical protein. | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.524 |
SDX49652.1 | SDX49581.1 | SAMN05421881_100280 | SAMN05421881_100278 | REP element-mobilizing transposase RayT. | Fic family protein. | 0.689 |
SDX49652.1 | SDX49615.1 | SAMN05421881_100280 | SAMN05421881_100279 | REP element-mobilizing transposase RayT. | Hypothetical protein. | 0.809 |
SDX49652.1 | SDX49683.1 | SAMN05421881_100280 | SAMN05421881_100281 | REP element-mobilizing transposase RayT. | Hypothetical protein. | 0.773 |
SDX49652.1 | SDX49765.1 | SAMN05421881_100280 | SAMN05421881_100283 | REP element-mobilizing transposase RayT. | Exonuclease SbcC. | 0.511 |
SDX49652.1 | sbcD | SAMN05421881_100280 | SAMN05421881_100282 | REP element-mobilizing transposase RayT. | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.524 |
SDX49683.1 | SDX49581.1 | SAMN05421881_100281 | SAMN05421881_100278 | Hypothetical protein. | Fic family protein. | 0.689 |
SDX49683.1 | SDX49615.1 | SAMN05421881_100281 | SAMN05421881_100279 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SDX49683.1 | SDX49652.1 | SAMN05421881_100281 | SAMN05421881_100280 | Hypothetical protein. | REP element-mobilizing transposase RayT. | 0.773 |
SDX49683.1 | SDX49765.1 | SAMN05421881_100281 | SAMN05421881_100283 | Hypothetical protein. | Exonuclease SbcC. | 0.511 |
SDX49683.1 | sbcD | SAMN05421881_100281 | SAMN05421881_100282 | Hypothetical protein. | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.524 |
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