STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX56635.1Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (85 aa)    
Predicted Functional Partners:
SDY94973.1
Toxin-antitoxin system, toxin component, Txe/YoeB family.
 
 
 0.950
SDX56684.1
Plasmid stabilization system protein ParE.
 
     0.948
SDY28852.1
mRNA interferase RelE/StbE.
   
 
 0.459
SDY78858.1
mRNA interferase RelE/StbE.
   
 
 0.459
SDZ00635.1
ParE-like toxin of type II toxin-antitoxin system.
   
 
 0.459
mntP
Putative Mn2+ efflux pump MntP; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.
       0.438
SDX56588.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.425
SDY75956.1
Hypothetical protein.
  
     0.403
Your Current Organism:
Nitrosomonas halophila
NCBI taxonomy Id: 44576
Other names: N. halophila, Nitrosomonas halophila Koops et al. 2001, strain Nm 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.