Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDX95709.1 | SDX95754.1 | SAMN05421881_101349 | SAMN05421881_101350 | ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. | TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | 0.821 |
SDX95709.1 | clpS | SAMN05421881_101349 | SAMN05421881_101348 | ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.996 |
SDX95754.1 | SDX95709.1 | SAMN05421881_101350 | SAMN05421881_101349 | TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. | 0.821 |
SDX95754.1 | SDY71247.1 | SAMN05421881_101350 | SAMN05421881_10566 | TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | TRAP-type mannitol/chloroaromatic compound transport system, small permease component. | 0.811 |
SDX95754.1 | SDY71284.1 | SAMN05421881_101350 | SAMN05421881_10567 | TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | TRAP transporter, DctM subunit. | 0.828 |
SDX95754.1 | clpS | SAMN05421881_101350 | SAMN05421881_101348 | TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.821 |
SDY71247.1 | SDX95754.1 | SAMN05421881_10566 | SAMN05421881_101350 | TRAP-type mannitol/chloroaromatic compound transport system, small permease component. | TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | 0.811 |
SDY71247.1 | SDY71284.1 | SAMN05421881_10566 | SAMN05421881_10567 | TRAP-type mannitol/chloroaromatic compound transport system, small permease component. | TRAP transporter, DctM subunit. | 0.922 |
SDY71284.1 | SDX95754.1 | SAMN05421881_10567 | SAMN05421881_101350 | TRAP transporter, DctM subunit. | TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | 0.828 |
SDY71284.1 | SDY71247.1 | SAMN05421881_10567 | SAMN05421881_10566 | TRAP transporter, DctM subunit. | TRAP-type mannitol/chloroaromatic compound transport system, small permease component. | 0.922 |
clpS | SDX95709.1 | SAMN05421881_101348 | SAMN05421881_101349 | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. | 0.996 |
clpS | SDX95754.1 | SAMN05421881_101348 | SAMN05421881_101350 | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | 0.821 |