STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY58884.1NAD(P)H-dependent FMN reductase. (193 aa)    
Predicted Functional Partners:
SDY37632.1
5,6-dimethylbenzimidazole synthase.
     
 0.655
SDY78550.1
Urea carboxylase.
    
  0.588
SDX83973.1
Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
  
 0.533
SDX71204.1
Uncharacterized membrane protein.
 
  
  0.484
SDX75482.1
N-ethylmaleimide reductase.
 
  
 0.471
SDY22830.1
Catechol 2,3-dioxygenase.
  
  
 0.448
SDY91109.1
Sulfite reductase (NADPH) flavoprotein alpha-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component.
     
 0.427
SDY63789.1
Succinate dehydrogenase / fumarate reductase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
    
 0.414
SDX66360.1
Sucrose-phosphate synthase.
    
  0.413
SDY20601.1
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
    
 0.408
Your Current Organism:
Nitrosomonas halophila
NCBI taxonomy Id: 44576
Other names: N. halophila, Nitrosomonas halophila Koops et al. 2001, strain Nm 1
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