STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY69368.1Putative addiction module component, TIGR02574 family. (79 aa)    
Predicted Functional Partners:
SDY69399.1
ParE toxin of type II toxin-antitoxin system, parDE.
       0.793
SDY69333.1
Toxin ParE1/3/4; Belongs to the RelE toxin family.
       0.485
SDY69294.1
Antitoxin ParD1/3/4.
       0.458
SDY69262.1
Hypothetical protein.
       0.403
Your Current Organism:
Nitrosomonas halophila
NCBI taxonomy Id: 44576
Other names: N. halophila, Nitrosomonas halophila Koops et al. 2001, strain Nm 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.