STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY77782.1V/A-type H+-transporting ATPase subunit E. (232 aa)    
Predicted Functional Partners:
SDY77708.1
V/A-type H+-transporting ATPase subunit I.
 
 0.999
SDY77746.1
V/A-type H+-transporting ATPase subunit K.
 
 0.999
atpA-2
V/A-type H+-transporting ATPase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
 0.999
SDY77638.1
V/A-type H+-transporting ATPase subunit B.
 
 0.999
SDY77672.1
V/A-type H+-transporting ATPase subunit D.
 
 0.999
SDY22477.1
Exosortase A.
  
 0.997
atpE
F-type H+-transporting ATPase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.997
SDY77817.1
Hypothetical protein.
 
     0.951
SDY53302.1
Histidine decarboxylase.
   
 
 0.516
SDY77894.1
Glycosyl hydrolase 108.
       0.408
Your Current Organism:
Nitrosomonas halophila
NCBI taxonomy Id: 44576
Other names: N. halophila, Nitrosomonas halophila Koops et al. 2001, strain Nm 1
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