Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY78428.1 | SDY78473.1 | SAMN05421881_10633 | SAMN05421881_10634 | Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | Membrane-bound lytic murein transglycosylase D. | 0.432 |
SDY78473.1 | SDY78428.1 | SAMN05421881_10634 | SAMN05421881_10633 | Membrane-bound lytic murein transglycosylase D. | Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.432 |
SDY78473.1 | SDY78509.1 | SAMN05421881_10634 | SAMN05421881_10635 | Membrane-bound lytic murein transglycosylase D. | Hypothetical protein. | 0.603 |
SDY78473.1 | SDZ03275.1 | SAMN05421881_10634 | SAMN05421881_11074 | Membrane-bound lytic murein transglycosylase D. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.439 |
SDY78473.1 | fliE | SAMN05421881_10634 | SAMN05421881_103819 | Membrane-bound lytic murein transglycosylase D. | Flagellar hook-basal body complex protein FliE. | 0.401 |
SDY78509.1 | SDY78473.1 | SAMN05421881_10635 | SAMN05421881_10634 | Hypothetical protein. | Membrane-bound lytic murein transglycosylase D. | 0.603 |
SDZ03275.1 | SDY78473.1 | SAMN05421881_11074 | SAMN05421881_10634 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Membrane-bound lytic murein transglycosylase D. | 0.439 |
SDZ03275.1 | fliE | SAMN05421881_11074 | SAMN05421881_103819 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar hook-basal body complex protein FliE. | 0.974 |
fliE | SDY78473.1 | SAMN05421881_103819 | SAMN05421881_10634 | Flagellar hook-basal body complex protein FliE. | Membrane-bound lytic murein transglycosylase D. | 0.401 |
fliE | SDZ03275.1 | SAMN05421881_103819 | SAMN05421881_11074 | Flagellar hook-basal body complex protein FliE. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.974 |