STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ04688.1Ammonia monooxygenase subunit B. (420 aa)    
Predicted Functional Partners:
SDZ04661.1
Ammonia monooxygenase subunit A.
 
 0.999
SDZ04636.1
Ammonia monooxygenase subunit C.
 
 
 0.998
SDY92833.1
Methane/ammonia monooxygenase subunit C.
 
 
 0.997
SDZ06451.1
Hydroxylamine dehydrogenase.
  
  
 0.974
SDZ04709.1
Hypothetical protein.
 
     0.871
SDZ04734.1
LPXTG-motif cell wall anchor domain-containing protein.
 
   
 0.858
SDY17439.1
Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
  0.855
SDX62220.1
Glutamine synthetase.
    
  0.852
SDY60054.1
Adenylate cyclase.
    
  0.805
SDY34355.1
MutS domain V.
  
 
   0.801
Your Current Organism:
Nitrosomonas halophila
NCBI taxonomy Id: 44576
Other names: N. halophila, Nitrosomonas halophila Koops et al. 2001, strain Nm 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.