STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALQ50991.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (449 aa)    
Predicted Functional Partners:
ALQ50990.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.875
ALQ49877.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.775
ALQ51758.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.617
ALQ50076.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.598
ALQ50448.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.598
ALQ50166.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.576
ALQ51839.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.575
ALQ50841.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.553
ALQ50972.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.545
ALQ51447.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.530
Your Current Organism:
Nitrosomonas ureae
NCBI taxonomy Id: 44577
Other names: N. ureae, Nitrosomonas ureae Koops et al. 2001, strain Nm 10
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.