STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALQ52564.1Cytidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (524 aa)    
Predicted Functional Partners:
ALQ50373.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.747
ALQ49992.1
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.740
ALQ52068.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.695
ALQ51703.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.694
ALQ51995.1
Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.694
ALQ52086.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.693
ALQ52073.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.691
ALQ49852.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.689
ALQ50730.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.672
ALQ52222.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.666
Your Current Organism:
Nitrosomonas ureae
NCBI taxonomy Id: 44577
Other names: N. ureae, Nitrosomonas ureae Koops et al. 2001, strain Nm 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.