Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALQ52271.1 | ALQ52272.1 | ATY38_14270 | ATY38_14275 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.504 |
ALQ52272.1 | ALQ52271.1 | ATY38_14275 | ATY38_14270 | Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.504 |
ALQ52272.1 | ALQ52273.1 | ATY38_14275 | ATY38_14280 | Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.452 |
ALQ52272.1 | ALQ52299.1 | ATY38_14275 | ATY38_14420 | Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.495 |
ALQ52273.1 | ALQ52272.1 | ATY38_14280 | ATY38_14275 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.452 |
ALQ52299.1 | ALQ52272.1 | ATY38_14420 | ATY38_14275 | Subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; Derived by automated computational analysis using gene prediction method: Protein Homology. | Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.495 |