STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Emin_0301Putative methyl-accepting chemotaxis sensory transducer; PFAM: histidine kinase HAMP region domain protein; KEGG: cac:CAC1507 sensory transduction histidine kinase (with HAMP domain). (161 aa)    
Predicted Functional Partners:
Emin_0302
PFAM: outer membrane efflux protein; KEGG: cph:Cpha266_0096 outer membrane efflux protein.
 
   
 0.847
Emin_0304
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: tet:TTHERM_00713550 TPR Domain containing protein Pfam: Pkinase_Tyr Pkinase TPR_2 TPR_1 LMP PROSITE: TPR TPR_REGION PROTEIN_KINASE_DOM.
  
   0.789
Emin_1214
Diguanylate cyclase with GAF sensor; KEGG: chy:CHY_0140 GGDEF domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GAF domain protein.
 
 
 0.763
Emin_0303
PFAM: Patatin; KEGG: afw:Anae109_1467 patatin.
       0.746
Emin_0306
Two-component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; Sigma-70 region 4 type 2; KEGG: eba:ebA6850 DNA-binding response regulator, LuxR family.
     
 0.658
Emin_0305
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: mms:mma_2611 signal transduction histidine kinase.
  
   0.654
Emin_0297
KEGG: chy:CHY_1375 fumarate hydratase; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region.
     
 0.617
Emin_0298
Putative fumarate hydratase; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: mta:Moth_2282 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region.
     
 0.617
Emin_0296
Malic enzyme, NADP+-dependent; PFAM: malic protein domain protein; malic protein NAD-binding; KEGG: tde:TDE2446 malate dehydrogenase.
  
    0.595
Emin_0300
Hypothetical protein.
       0.594
Your Current Organism:
Elusimicrobium minutum
NCBI taxonomy Id: 445932
Other names: E. minutum Pei191, Elusimicrobium minutum Pei191, Elusimicrobium minutum str. Pei191, Elusimicrobium minutum strain Pei191
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