STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Emin_0413PFAM: metallophosphoesterase; KEGG: det:DET0403 Ser/Thr protein phosphatase family protein. (246 aa)    
Predicted Functional Partners:
Emin_0414
PFAM: major facilitator superfamily MFS_1; KEGG: psa:PST_3502 drug resistance transporter, EmrB/QacA family.
       0.773
Emin_1305
Non-canonical purine NTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
  
  
 0.692
smc
Chromosome segregation ATPase; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
    0.682
Emin_0415
Acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
       0.595
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
       0.574
Emin_0416
Hypothetical protein.
       0.570
Emin_0270
PFAM: Ankyrin; KEGG: spu:579192 similar to ankyrin 2,3/unc44.
    
 
 0.469
Emin_0662
PFAM: Ankyrin; KEGG: tva:TVAG_291510 ankyrin repeat protein, putative Pfam: Ank Clathrin PROSITE: ANK_REPEAT ANK_REP_REGION.
    
 
 0.469
Emin_0830
Hypothetical protein; KEGG: spu:587475 similar to ankyrin 2,3/unc44.
    
 
 0.469
Emin_1071
PFAM: Ankyrin; KEGG: tva:TVAG_059270 ankyrin repeat protein, putative Pfam: Ank PROSITE: ANK_REPEAT ANK_REP_REGION.
    
 
 0.469
Your Current Organism:
Elusimicrobium minutum
NCBI taxonomy Id: 445932
Other names: E. minutum Pei191, Elusimicrobium minutum Pei191, Elusimicrobium minutum str. Pei191, Elusimicrobium minutum strain Pei191
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