STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zupTZinc transporter; Mediates zinc uptake. May also transport other divalent cations; Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily. (265 aa)    
Predicted Functional Partners:
Emin_0447
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mxa:MXAN_3746 oxidoreductase, short chain dehydrogenase/reductase family.
   
   0.776
Emin_0449
PilE-like protein; KEGG: cyb:CYB_0475 general secretion pathway protein G, putative.
       0.768
Emin_0446
Hypothetical protein.
       0.762
Emin_0445
TIGRFAM: TonB family protein; KEGG: hac:Hac_0271 siderophore-mediated iron transport protein.
     
 0.636
Emin_0443
Biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel; KEGG: bba:Bd0477 TolQ protein.
  
  
 0.629
Emin_0444
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: lip:LI0694 biopolymer transport protein.
       0.584
Emin_0909
TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: lin:lin2720 similar to cation transport protein (efflux).
   
 0.527
Emin_1073
Putative indolepyruvate ferredoxin oxidoreductase; TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; FeoA family protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: mtp:Mthe_0703 small GTP-binding protein.
     
 0.509
Emin_0187
Hypothetical protein; KEGG: mbn:Mboo_0073 cytochrome c biogenesis protein, transmembrane region.
   
    0.461
Emin_0436
Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.408
Your Current Organism:
Elusimicrobium minutum
NCBI taxonomy Id: 445932
Other names: E. minutum Pei191, Elusimicrobium minutum Pei191, Elusimicrobium minutum str. Pei191, Elusimicrobium minutum strain Pei191
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