STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Emin_0486Sporulation protein-like protein; KEGG: gur:Gura_1714 SpoIID/LytB domain. (714 aa)    
Predicted Functional Partners:
Emin_0487
Glycosyltransferase; PFAM: glycosyl transferase group 1; KEGG: pth:PTH_2565 hypothetical membrane protein.
       0.774
Emin_0110
Hypothetical protein; KEGG: chu:CHU_0029 gliding motility-related protein.
  
     0.713
Emin_0202
KEGG: sfu:Sfum_2085 hypothetical protein.
  
     0.712
Emin_0506
TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation D domain protein; KEGG: gme:Gmet_0850 stage II sporulation-related protein.
  
     0.699
Emin_0600
SMART: Tetratricopeptide domain protein; KEGG: nve:NEMVE_v1g218747 predicted protein Pfam: TPR_1 TPR_2 Fibrinogen_BP MIT CitG PROSITE: TPR TPR_REGION.
  
     0.676
Emin_0161
Transcription-repair coupling factor; KEGG: tle:Tlet_0933 permease YjgP/YjgQ family protein.
 
     0.673
Emin_0302
PFAM: outer membrane efflux protein; KEGG: cph:Cpha266_0096 outer membrane efflux protein.
  
     0.668
Emin_1528
Putative lysophospholipase; KEGG: hch:HCH_05076 hydrolase of the alpha/beta superfamily.
 
     0.648
Emin_1212
KEGG: sru:SRU_1207 hypothetical protein.
  
     0.630
Emin_0898
Large extracellular alpha-helical protein; PFAM: alpha-2-macroglobulin domain protein; KEGG: mxa:MXAN_2974 hypothetical protein.
 
     0.590
Your Current Organism:
Elusimicrobium minutum
NCBI taxonomy Id: 445932
Other names: E. minutum Pei191, Elusimicrobium minutum Pei191, Elusimicrobium minutum str. Pei191, Elusimicrobium minutum strain Pei191
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