STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Emin_0511Putative translation factor; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: det:DET0835 SUA5/YciO/YrdC/YwlC family protein; Belongs to the SUA5 family. (210 aa)    
Predicted Functional Partners:
rsmI
Uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
     
 0.793
Emin_0510
Putative two-component system; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sth:STH1040 two-component sensor histidine kinase.
       0.774
tsaD
Metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 
 0.694
Emin_1156
Glycoprotease family protein; PFAM: peptidase M22 glycoprotease; KEGG: lme:LEUM_1778 metal-dependent protease-like protein, putative molecular chaperone.
    
 0.669
Emin_1157
Conserved hypothetical nucleotide-binding protein; PFAM: protein of unknown function UPF0079; KEGG: tte:TTE0535 predicted ATPase or kinase.
    
 0.668
Emin_0513
KEGG: tcr:507957.179 mucin-associated surface protein (MASP), putative Pfam: TolA Phasin_2 MAP7 Vicilin_N PROSITE: ALA_RICH.
       0.581
purC-2
KEGG: pmy:Pmen_1665 phosphoribosylaminoimidazole-succinocarboxamide synthase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase.
  
  
 0.462
Emin_0981
Hypothetical protein; KEGG: spj:MGAS2096_Spy0560 chromosome segregation ATPases.
   
   0.430
polA
DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.427
cysS
KEGG: vha:VIBHAR_02459 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); Cysteinyl-tRNA synthetase class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
   
 0.419
Your Current Organism:
Elusimicrobium minutum
NCBI taxonomy Id: 445932
Other names: E. minutum Pei191, Elusimicrobium minutum Pei191, Elusimicrobium minutum str. Pei191, Elusimicrobium minutum strain Pei191
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