STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Emin_0532FeFe Hydrogenase HydB (NuoF); PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: chy:CHY_0732 Fe-hydrogenase, beta subunit. (620 aa)    
Predicted Functional Partners:
Emin_0533
FeFe hydrogenase HydA (NuoG); TIGRFAM: hydrogenase, Fe-only; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; iron hydrogenase small subunit; hydrogenase large subunit domain protein; KEGG: mta:Moth_1717 iron hydrogenase, small subunit.
 
 
 0.999
Emin_1101
Polyketide synthase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: rrs:RoseRS_2905 beta-ketoacyl synthase.
  
 0.999
Emin_1128
Ech hydrogenase subunit F; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ppd:Ppro_0597 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
 
 0.999
Emin_1129
PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: ppd:Ppro_0596 respiratory-chain NADH dehydrogenase, subunit 1.
  
 0.999
Emin_1131
Putative Ech hydrogenase component; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: ppd:Ppro_3525 NADH dehydrogenase (ubiquinone), 30 kDa subunit.
  
 0.999
Emin_1134
Putative Ech hydrogenase component; PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: ppd:Ppro_0591 NADH-ubiquinone oxidoreductase, chain 4L.
  
 
 0.999
Emin_1137
Putative Ech hydrogenase component; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: ppd:Ppro_3531 NADH dehydrogenase (quinone).
  
 
 0.999
Emin_1138
Putative Ech hydrogenase component; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: ppd:Ppro_3532 NADH dehydrogenase (quinone).
  
 
 0.999
Emin_0531
PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: cdf:CD3405 putative iron-only hydrogenase,electron-transferring subunit.
 0.998
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.997
Your Current Organism:
Elusimicrobium minutum
NCBI taxonomy Id: 445932
Other names: E. minutum Pei191, Elusimicrobium minutum Pei191, Elusimicrobium minutum str. Pei191, Elusimicrobium minutum strain Pei191
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