STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Emin_0613Type II secretion system subunit; KEGG: psa:PST_1054 fimbrial protein EcpC precursor. (165 aa)    
Predicted Functional Partners:
Emin_0612
KEGG: nma:NMA0264 fimbrial protein precursor (pilin).
 
 
  
0.781
Emin_0611
Putative galactose mutarotase; KEGG: rrs:RoseRS_1361 hypothetical protein.
     
 0.504
Emin_0579
PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mxa:MXAN_5788 type IV-A pilus assembly ATPase PilB.
  
 
 0.422
Emin_0610
TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: ctc:CTC00514 putative sodium/myo-inositol cotransporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.410
Your Current Organism:
Elusimicrobium minutum
NCBI taxonomy Id: 445932
Other names: E. minutum Pei191, Elusimicrobium minutum Pei191, Elusimicrobium minutum str. Pei191, Elusimicrobium minutum strain Pei191
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.