STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Emin_0879ABC-type multidrug transport system; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: ctc:CTC01410 transporter. (592 aa)    
Predicted Functional Partners:
Emin_0328
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sat:SYN_00410 ABC-type transport system, ATP-binding component.
    
0.906
Emin_1101
Polyketide synthase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: rrs:RoseRS_2905 beta-ketoacyl synthase.
  
 0.853
Emin_0880
ABC-type multidrug transport system; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ckl:CKL_3735 predicted transport protein, ATPase and permease component.
 
    
0.807
Emin_0995
Non-ribosomal peptide synthetase; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: bld:BLi00401 lichenysin synthetase A.
 
 0.743
Emin_0883
PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: mac:MA3471 hypothetical protein.
     
 0.720
Emin_0881
PFAM: NAD/NADP octopine/nopaline dehydrogenase; KEGG: tpd:Teth39_1425 NAD/NADP octopine/nopaline dehydrogenase.
       0.719
Emin_0882
PFAM: major facilitator superfamily MFS_1; KEGG: mbn:Mboo_1880 drug resistance transporter, EmrB/QacA subfamily.
    
 0.719
Emin_0878
TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: dsy:DSY0733 hypothetical protein.
 
     0.686
Emin_1179
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sat:SYN_01994 ABC transporter ATP-binding protein.
    
0.672
Emin_0884
Hypothetical protein.
       0.664
Your Current Organism:
Elusimicrobium minutum
NCBI taxonomy Id: 445932
Other names: E. minutum Pei191, Elusimicrobium minutum Pei191, Elusimicrobium minutum str. Pei191, Elusimicrobium minutum strain Pei191
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.