STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Emin_1051TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: tte:TTE0259 hemerythrin. (137 aa)    
Predicted Functional Partners:
Emin_1050
PFAM: MscS Mechanosensitive ion channel; KEGG: bfs:BF4330 putative transmembrane ion channel.
  
    0.486
Emin_0806
Pyruvate:ferredoxin oxidoreductase; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: gur:Gura_4330 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
   
 
 0.473
Emin_0012
Rubredoxin:oxygen oxidoreductase Roo; PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: dol:Dole_2654 flavodoxin/nitric oxide synthase.
  
  
 0.453
Emin_0878
TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: dsy:DSY0733 hypothetical protein.
  
  
 0.453
Your Current Organism:
Elusimicrobium minutum
NCBI taxonomy Id: 445932
Other names: E. minutum Pei191, Elusimicrobium minutum Pei191, Elusimicrobium minutum str. Pei191, Elusimicrobium minutum strain Pei191
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