STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Emin_1069Putative phosphoglycerol transferase; PFAM: sulfatase; KEGG: sbl:Sbal_0309 sulfatase. (641 aa)    
Predicted Functional Partners:
Emin_1068
Putative RecB family exonuclease; KEGG: deh:cbdb_A602 hypothetical protein.
       0.773
Emin_0565
Sulfatase family protein; PFAM: sulfatase; KEGG: lic:LIC11401 phosphoglycerol transferase related protein.
  
     0.738
Emin_1070
PFAM: carbohydrate kinase FGGY; KEGG: maa:MAG509 glycerol kinase.
       0.737
Emin_1067
PFAM: phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: cbf:CLI_1444 PTS system, IIBC components.
       0.554
Emin_1066
KEGG: fjo:Fjoh_4322 G:T/U mismatch-specific DNA glycosylase-like protein.
       0.468
Emin_1101
Polyketide synthase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: rrs:RoseRS_2905 beta-ketoacyl synthase.
     
 0.442
Your Current Organism:
Elusimicrobium minutum
NCBI taxonomy Id: 445932
Other names: E. minutum Pei191, Elusimicrobium minutum Pei191, Elusimicrobium minutum str. Pei191, Elusimicrobium minutum strain Pei191
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