STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Emin_1185Putative 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class V; aminotransferase class I and II; KEGG: mxa:MXAN_3748 aminotransferase, class II. (396 aa)    
Predicted Functional Partners:
Emin_1101
Polyketide synthase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: rrs:RoseRS_2905 beta-ketoacyl synthase.
 
 
 0.863
Emin_1186
KEGG: sus:Acid_5449 hypothetical protein.
   
 0.806
Emin_1183
Acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
   
 
 0.734
Emin_1184
RfaE bifunctional protein; TIGRFAM: cytidyltransferase-related domain protein; rfaE bifunctional protein; PFAM: cytidylyltransferase; KEGG: abu:Abu_1797 ADP-heptose synthase.
       0.686
Emin_1182
PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: chy:CHY_1999 pyruvate carboxylase subunit B.
     
 0.681
Emin_1329
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: tex:Teth514_0563 radical SAM domain protein.
  
  
 0.612
Emin_1012
PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; KEGG: mag:amb2972 acyl-CoA synthetase/AMP-acid ligase II.
  
 
 0.573
Emin_0995
Non-ribosomal peptide synthetase; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: bld:BLi00401 lichenysin synthetase A.
 
  
 0.541
Emin_0146
Putative threonine dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pfu:PF0991 L-threonine 3-dehydrogenase.
 
  
 0.514
Emin_1181
Pre-protein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
     
 0.481
Your Current Organism:
Elusimicrobium minutum
NCBI taxonomy Id: 445932
Other names: E. minutum Pei191, Elusimicrobium minutum Pei191, Elusimicrobium minutum str. Pei191, Elusimicrobium minutum strain Pei191
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