Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Emin_1237Putative fatty acid Co-A ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: nis:NIS_0535 long-chain fatty-acid-CoA ligase. (533 aa)    
Predicted Functional Partners:
Emin_1101
Polyketide synthase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: rrs:RoseRS_2905 beta-ketoacyl synthase.
  
 0.990
Emin_0995
Non-ribosomal peptide synthetase; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: bld:BLi00401 lichenysin synthetase A.
 
 
0.890
Emin_0532
FeFe Hydrogenase HydB (NuoF); PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: chy:CHY_0732 Fe-hydrogenase, beta subunit.
  
 
 0.820
Emin_1486
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rca:Rcas_2878 acyl-CoA dehydrogenase domain protein.
 
 
 0.724
Emin_1238
PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: deb:DehaBAV1_0314 polynucleotide adenylyltransferase/metal dependent phosphohydrolase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.705
Emin_1235
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tme:Tmel_1735 binding-protein-dependent transport systems inner membrane component.
  
    0.635
Emin_1234
ABC-type dipeptide/oligopeptide/nickel transport system; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: oan:Oant_1292 ABC transporter related.
     
 0.630
Emin_1233
ABC-type dipeptide/oligopeptide/nickel transport system; KEGG: chy:CHY_1126 oligopeptide/dipeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
       0.625
Emin_1236
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tle:Tlet_0649 binding-protein-dependent transport systems inner membrane component.
       0.625
rplC
Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.617
Your Current Organism:
Elusimicrobium minutum
NCBI taxonomy Id: 445932
Other names: E. minutum Pei191, Elusimicrobium minutum Pei191, Elusimicrobium minutum str. Pei191, Elusimicrobium minutum strain Pei191
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.