STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Emin_1268PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: nve:NEMVE_v1g178888 predicted protein Pfam: Peptidase_M3 Nse4 PROSITE: ZINC_PROTEASE. (681 aa)    
Predicted Functional Partners:
Emin_1269
PFAM: phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: sun:SUN_1277 phosphoglucomutase, alpha-D-glucose phosphate-specific.
  
    0.774
Emin_1270
KEGG: tcx:Tcr_0046 hypothetical protein.
       0.544
Emin_1273
ATPases involved in chromosome partitioning; KEGG: pab:PAB0400 hypothetical MRP protein.
  
    0.409
Your Current Organism:
Elusimicrobium minutum
NCBI taxonomy Id: 445932
Other names: E. minutum Pei191, Elusimicrobium minutum Pei191, Elusimicrobium minutum str. Pei191, Elusimicrobium minutum strain Pei191
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.