STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Emin_1288Putative phosphohistidine phosphatase, SixA; PFAM: Phosphoglycerate mutase; KEGG: cco:CCC13826_1261 phosphoglycerate mutase family protein. (165 aa)    
Predicted Functional Partners:
uppP
Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.783
Emin_1286
PFAM: UvrD/REP helicase; KEGG: mem:Memar_1498 UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily.
       0.602
Emin_1284
PFAM: CoA-binding domain protein; KEGG: tpd:Teth39_1005 CoA-binding domain protein.
  
    0.579
Emin_1287
KEGG: ctc:CTC00686 ATP-dependent nuclease subunit B.
       0.571
Emin_1283
Putative oxidoreductase; PFAM: aldo/keto reductase; KEGG: atc:AGR_L_1936 hypothetical protein.
  
    0.558
Emin_1282
KEGG: sfu:Sfum_1261 DNA repair photolyase-like.
       0.530
Emin_1285
Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.
       0.530
Your Current Organism:
Elusimicrobium minutum
NCBI taxonomy Id: 445932
Other names: E. minutum Pei191, Elusimicrobium minutum Pei191, Elusimicrobium minutum str. Pei191, Elusimicrobium minutum strain Pei191
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