STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI19052.1Por secretion system C-terminal sorting domain-containing protein. (472 aa)    
Predicted Functional Partners:
SDI13883.1
JAB domain-containing protein.
    
 0.806
SDI13908.1
ThiF family protein.
    
 0.806
nuoM
NADH dehydrogenase subunit M.
    
 
 0.739
SDJ19301.1
Hypothetical protein.
    
  0.738
iphP
Protein-tyrosine phosphatase.
    
   0.738
SDI17128.1
Hypothetical protein.
    
  0.691
SDI19016.1
Por secretion system C-terminal sorting domain-containing protein.
      
0.576
SDI19084.1
Por secretion system C-terminal sorting domain-containing protein.
      
0.465
ppiB_1
Peptidyl-prolyl cis-trans isomerase A (cyclophilin A).
    
 0.441
ychM_2
Sulfate permease, MFS superfamily.
    
   0.428
Your Current Organism:
Chryseobacterium jejuense
NCBI taxonomy Id: 445960
Other names: C. jejuense, Chryseobacterium jejuense Weon et al. 2008 emend. Montero-Calasanz et al. 2014, Chryseobacterium jejuense Weon et al. 2008 emend. Wu et al. 2013, Chryseobacterium sp. JS17-8, DSM 19299, KACC 12501, strain JS17-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.