Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI26600.1 | SDI26629.1 | SAMN05421542_0638 | SAMN05421542_0639 | Iron complex outermembrane recepter protein. | Uncharacterized iron-regulated membrane protein. | 0.793 |
SDI26600.1 | SDI26656.1 | SAMN05421542_0638 | SAMN05421542_0640 | Iron complex outermembrane recepter protein. | Hypothetical protein. | 0.401 |
SDI26600.1 | SDI29381.1 | SAMN05421542_0638 | SAMN05421542_0742 | Iron complex outermembrane recepter protein. | FecR family protein. | 0.592 |
SDI26629.1 | SDI26600.1 | SAMN05421542_0639 | SAMN05421542_0638 | Uncharacterized iron-regulated membrane protein. | Iron complex outermembrane recepter protein. | 0.793 |
SDI26629.1 | SDI26656.1 | SAMN05421542_0639 | SAMN05421542_0640 | Uncharacterized iron-regulated membrane protein. | Hypothetical protein. | 0.773 |
SDI26629.1 | SDI29381.1 | SAMN05421542_0639 | SAMN05421542_0742 | Uncharacterized iron-regulated membrane protein. | FecR family protein. | 0.413 |
SDI26629.1 | fhuA_1 | SAMN05421542_0639 | SAMN05421542_1825 | Uncharacterized iron-regulated membrane protein. | Iron complex outermembrane recepter protein. | 0.605 |
SDI26629.1 | fhuA_2 | SAMN05421542_0639 | SAMN05421542_1757 | Uncharacterized iron-regulated membrane protein. | Iron complex outermembrane recepter protein. | 0.706 |
SDI26629.1 | fhuA_3 | SAMN05421542_0639 | SAMN05421542_0718 | Uncharacterized iron-regulated membrane protein. | Iron complex outermembrane recepter protein. | 0.556 |
SDI26629.1 | fhuE_1 | SAMN05421542_0639 | SAMN05421542_1824 | Uncharacterized iron-regulated membrane protein. | Iron complex outermembrane recepter protein. | 0.686 |
SDI26629.1 | fhuE_2 | SAMN05421542_0639 | SAMN05421542_1245 | Uncharacterized iron-regulated membrane protein. | Iron complex outermembrane recepter protein. | 0.547 |
SDI26629.1 | pupA_1 | SAMN05421542_0639 | SAMN05421542_2437 | Uncharacterized iron-regulated membrane protein. | Iron complex outermembrane recepter protein. | 0.591 |
SDI26629.1 | pupA_2 | SAMN05421542_0639 | SAMN05421542_4021 | Uncharacterized iron-regulated membrane protein. | Iron complex outermembrane recepter protein. | 0.574 |
SDI26656.1 | SDI26600.1 | SAMN05421542_0640 | SAMN05421542_0638 | Hypothetical protein. | Iron complex outermembrane recepter protein. | 0.401 |
SDI26656.1 | SDI26629.1 | SAMN05421542_0640 | SAMN05421542_0639 | Hypothetical protein. | Uncharacterized iron-regulated membrane protein. | 0.773 |
SDI29381.1 | SDI26600.1 | SAMN05421542_0742 | SAMN05421542_0638 | FecR family protein. | Iron complex outermembrane recepter protein. | 0.592 |
SDI29381.1 | SDI26629.1 | SAMN05421542_0742 | SAMN05421542_0639 | FecR family protein. | Uncharacterized iron-regulated membrane protein. | 0.413 |
SDI29381.1 | fhuA_1 | SAMN05421542_0742 | SAMN05421542_1825 | FecR family protein. | Iron complex outermembrane recepter protein. | 0.573 |
SDI29381.1 | fhuA_2 | SAMN05421542_0742 | SAMN05421542_1757 | FecR family protein. | Iron complex outermembrane recepter protein. | 0.691 |
SDI29381.1 | fhuA_3 | SAMN05421542_0742 | SAMN05421542_0718 | FecR family protein. | Iron complex outermembrane recepter protein. | 0.694 |
page 1 of 2